diff options
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 31 |
1 files changed, 31 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 899b06aa34..a08ad46110 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -30,6 +30,7 @@ #:use-module (gnu packages gcc) #:use-module (gnu packages graph) #:use-module (gnu packages maths) + #:use-module (gnu packages pkg-config) #:use-module (gnu packages statistics) #:use-module (gnu packages web)) @@ -1837,3 +1838,33 @@ and regression inferences from RNA-sequencing data.") "This package provides tools for differential expression analysis at both gene and isoform level using RNA-seq data") (license license:artistic2.0))) + +(define-public r-lpsymphony + (package + (name "r-lpsymphony") + (version "1.10.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "lpsymphony" version)) + (sha256 + (base32 + "0vnsf5x6gvd1k8h89al7r6xbgbxsjbxphr675czzwggz79zbvq7y")))) + (build-system r-build-system) + (inputs + `(("gfortran" ,gfortran) + ("zlib" ,zlib))) + (native-inputs + `(("pkg-config" ,pkg-config))) + (home-page "http://r-forge.r-project.org/projects/rsymphony") + (synopsis "Symphony integer linear programming solver in R") + (description + "This package was derived from Rsymphony. The package provides an R +interface to SYMPHONY, a linear programming solver written in C++. The main +difference between this package and Rsymphony is that it includes the solver +source code, while Rsymphony expects to find header and library files on the +users' system. Thus the intention of @code{lpsymphony} is to provide an easy +to install interface to SYMPHONY.") + ;; Symphony 5.4 or later is distributed under the terms of the EPL 1.0. + ;; lpsimphony is released under the same terms. + (license license:epl1.0))) |