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authorRicardo Wurmus <rekado@elephly.net>2019-03-13 09:09:00 +0100
committerRicardo Wurmus <rekado@elephly.net>2019-03-13 13:17:51 +0100
commit3087a2f37b5588deac54351fe4f240160b5d57b7 (patch)
tree0a44b138118c4fd7ad0a33e91506336afa851adf /gnu
parent7ed869f7962a07473af7f3e6671cda2f87792b77 (diff)
gnu: Add r-ebseq.
* gnu/packages/bioconductor.scm (r-ebseq): New variable.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioconductor.scm24
1 files changed, 24 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 7127e963bb..899b06aa34 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1813,3 +1813,27 @@ and summarizing a set of statistics using a weighted distance approach.")
"This package provides negative binomial models for two-group comparisons
and regression inferences from RNA-sequencing data.")
(license license:gpl2)))
+
+(define-public r-ebseq
+ (package
+ (name "r-ebseq")
+ (version "1.22.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "EBSeq" version))
+ (sha256
+ (base32
+ "1gzbk1hbwdan0j131ah88yryfvsiq0wqjnb09qbr4qaczpgvbad0"))))
+ (properties `((upstream-name . "EBSeq")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-blockmodeling" ,r-blockmodeling)
+ ("r-gplots" ,r-gplots)
+ ("r-testthat" ,r-testthat)))
+ (home-page "https://bioconductor.org/packages/EBSeq")
+ (synopsis "Differential expression analysis of RNA-seq data")
+ (description
+ "This package provides tools for differential expression analysis at both
+gene and isoform level using RNA-seq data")
+ (license license:artistic2.0)))