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Subject: bug#26095: R: do not build recommended packages
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This relates to bug 25598 “R packages are not bit-reproducible”. R
itself does not build reproducibly. One of the reasons is that it
includes recommended packages that are built in a random temporary
directory. The build paths for each of these packages is then embedded
in the packages’ “paths.rds” files.
We don’t have this problem when building the packages with the
“r-build-system” like any other R package.
This patch set adds package expressions for each of the recommended
packages, disables building of recommended packages, and adds some of
these packages to those R packages that need them.
I’ve successfully rebuilt all R packages to make sure that these changes
don’t break anything.
I also have an unpolished patch to fix bug 25598, but it depends on this
patch set.
--
Ricardo
GPG: BCA6 89B6 3655 3801 C3C6 2150 197A 5888 235F ACAC
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Acknowledgement sent
to Ricardo Wurmus <rekado@example.com>:
New bug report received and forwarded. Copy sent to guix-patches@gnu.org.
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To: Ricardo Wurmus
Subject: bug#26095: Acknowledgement (R: do not build recommended packages)
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Subject: R: do not build recommended packages
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This relates to bug 25598 “R packages are not bit-reproducible”. R
itself does not build reproducibly. One of the reasons is that it
includes recommended packages that are built in a random temporary
directory. The build paths for each of these packages is then embedded
in the packages’ “paths.rds” files.
We don’t have this problem when building the packages with the
“r-build-system” like any other R package.
This patch set adds package expressions for each of the recommended
packages, disables building of recommended packages, and adds some of
these packages to those R packages that need them.
I’ve successfully rebuilt all R packages to make sure that these changes
don’t break anything.
I also have an unpolished patch to fix bug 25598, but it depends on this
patch set.
--
Ricardo
GPG: BCA6 89B6 3655 3801 C3C6 2150 197A 5888 235F ACAC
https://example.com
Information forwarded
to guix-patches@gnu.org:
bug#26095; Package guix-patches.
guix-patches@gnu.org
X-Loop: help-debbugs@gnu.org
Subject: bug#26095: [PATCH 02/17] gnu: Add r-mass.
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* gnu/packages/statistics.scm (r-mass): New variable.
---
gnu/packages/statistics.scm | 21 +++++++++++++++++++++
1 file changed, 21 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 54305a2f8..189a1d299 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -241,6 +241,27 @@ D.V. Hinkley (1997, CUP), originally written by Angelo Canty for S.")
;; Unlimited distribution
(license (license:non-copyleft "file://R/bootfuns.q"))))
+(define-public r-mass
+ (package
+ (name "r-mass")
+ (version "7.3-45")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "MASS" version))
+ (sha256
+ (base32
+ "13lp5919h2bnpmf8rbmkar8a41yx62fnx66pkvljvqf60wa29qsx"))))
+ (properties `((upstream-name . "MASS")))
+ (build-system r-build-system)
+ (home-page "http://www.stats.ox.ac.uk/pub/MASS4/")
+ (synopsis "Support functions and datasets for Venables and Ripley's MASS")
+ (description
+ "This package provides functions and datasets for the book \"Modern
+Applied Statistics with S\" (4th edition, 2002) by Venables and Ripley.")
+ ;; Either version may be picked.
+ (license (list license:gpl2 license:gpl3))))
+
(define-public r-bit
(package
(name "r-bit")
--
2.12.0
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From: Ricardo Wurmus
To: 26095@debbugs.gnu.org
Subject: [PATCH 02/17] gnu: Add r-mass.
Date: Tue, 14 Mar 2017 10:02:41 +0100
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* gnu/packages/statistics.scm (r-mass): New variable.
---
gnu/packages/statistics.scm | 21 +++++++++++++++++++++
1 file changed, 21 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 54305a2f8..189a1d299 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -241,6 +241,27 @@ D.V. Hinkley (1997, CUP), originally written by Angelo Canty for S.")
;; Unlimited distribution
(license (license:non-copyleft "file://R/bootfuns.q"))))
+(define-public r-mass
+ (package
+ (name "r-mass")
+ (version "7.3-45")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "MASS" version))
+ (sha256
+ (base32
+ "13lp5919h2bnpmf8rbmkar8a41yx62fnx66pkvljvqf60wa29qsx"))))
+ (properties `((upstream-name . "MASS")))
+ (build-system r-build-system)
+ (home-page "http://www.stats.ox.ac.uk/pub/MASS4/")
+ (synopsis "Support functions and datasets for Venables and Ripley's MASS")
+ (description
+ "This package provides functions and datasets for the book \"Modern
+Applied Statistics with S\" (4th edition, 2002) by Venables and Ripley.")
+ ;; Either version may be picked.
+ (license (list license:gpl2 license:gpl3))))
+
(define-public r-bit
(package
(name "r-bit")
--
2.12.0
Information forwarded
to guix-patches@gnu.org:
bug#26095; Package guix-patches.
guix-patches@gnu.org
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Subject: bug#26095: [PATCH 01/17] gnu: Add r-boot.
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* gnu/packages/statistics.scm (r-boot): New variable.
---
gnu/packages/statistics.scm | 21 +++++++++++++++++++++
1 file changed, 21 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 75bdb5df8..54305a2f8 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -220,6 +220,27 @@ publication-quality data plots. A large amount of 3rd-party packages are
available, greatly increasing its breadth and scope.")
(license license:gpl3+)))
+(define-public r-boot
+ (package
+ (name "r-boot")
+ (version "1.3-18")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "boot" version))
+ (sha256
+ (base32
+ "0pi348vvgzn1ny54yxhw6kq6nl7rx9bpr9ji1a6wqs8ah5zj7z8j"))))
+ (build-system r-build-system)
+ (home-page "http://cran.r-project.org/web/packages/boot")
+ (synopsis "Bootstrap functions for R")
+ (description
+ "This package provides functions and datasets for bootstrapping from the
+book \"Bootstrap Methods and Their Application\" by A.C. Davison and
+D.V. Hinkley (1997, CUP), originally written by Angelo Canty for S.")
+ ;; Unlimited distribution
+ (license (license:non-copyleft "file://R/bootfuns.q"))))
+
(define-public r-bit
(package
(name "r-bit")
--
2.12.0
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From: Ricardo Wurmus
To: 26095@debbugs.gnu.org
Subject: [PATCH 01/17] gnu: Add r-boot.
Date: Tue, 14 Mar 2017 10:02:40 +0100
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* gnu/packages/statistics.scm (r-boot): New variable.
---
gnu/packages/statistics.scm | 21 +++++++++++++++++++++
1 file changed, 21 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 75bdb5df8..54305a2f8 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -220,6 +220,27 @@ publication-quality data plots. A large amount of 3rd-party packages are
available, greatly increasing its breadth and scope.")
(license license:gpl3+)))
+(define-public r-boot
+ (package
+ (name "r-boot")
+ (version "1.3-18")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "boot" version))
+ (sha256
+ (base32
+ "0pi348vvgzn1ny54yxhw6kq6nl7rx9bpr9ji1a6wqs8ah5zj7z8j"))))
+ (build-system r-build-system)
+ (home-page "http://cran.r-project.org/web/packages/boot")
+ (synopsis "Bootstrap functions for R")
+ (description
+ "This package provides functions and datasets for bootstrapping from the
+book \"Bootstrap Methods and Their Application\" by A.C. Davison and
+D.V. Hinkley (1997, CUP), originally written by Angelo Canty for S.")
+ ;; Unlimited distribution
+ (license (license:non-copyleft "file://R/bootfuns.q"))))
+
(define-public r-bit
(package
(name "r-bit")
--
2.12.0
Information forwarded
to guix-patches@gnu.org:
bug#26095; Package guix-patches.
guix-patches@gnu.org
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Subject: bug#26095: [PATCH 03/17] gnu: Add r-class.
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* gnu/packages/statistics.scm (r-class): New variable.
---
gnu/packages/statistics.scm | 22 ++++++++++++++++++++++
1 file changed, 22 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 189a1d299..9199c0b9e 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -262,6 +262,28 @@ Applied Statistics with S\" (4th edition, 2002) by Venables and Ripley.")
;; Either version may be picked.
(license (list license:gpl2 license:gpl3))))
+(define-public r-class
+ (package
+ (name "r-class")
+ (version "7.3-14")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "class" version))
+ (sha256
+ (base32
+ "173b8a16lh1i0zjmr784l0xr0azp9v8bgslh12hfdswbq7dpdf0q"))))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-mass" ,r-mass)))
+ (home-page "http://www.stats.ox.ac.uk/pub/MASS4/")
+ (synopsis "R functions for classification")
+ (description
+ "This package provides various functions for classification, including
+k-nearest neighbour, Learning Vector Quantization and Self-Organizing Maps.")
+ ;; Either of the two versions can be picked.
+ (license (list license:gpl2 license:gpl3))))
+
(define-public r-bit
(package
(name "r-bit")
--
2.12.0
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To: 26095@debbugs.gnu.org
Subject: [PATCH 03/17] gnu: Add r-class.
Date: Tue, 14 Mar 2017 10:02:42 +0100
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* gnu/packages/statistics.scm (r-class): New variable.
---
gnu/packages/statistics.scm | 22 ++++++++++++++++++++++
1 file changed, 22 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 189a1d299..9199c0b9e 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -262,6 +262,28 @@ Applied Statistics with S\" (4th edition, 2002) by Venables and Ripley.")
;; Either version may be picked.
(license (list license:gpl2 license:gpl3))))
+(define-public r-class
+ (package
+ (name "r-class")
+ (version "7.3-14")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "class" version))
+ (sha256
+ (base32
+ "173b8a16lh1i0zjmr784l0xr0azp9v8bgslh12hfdswbq7dpdf0q"))))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-mass" ,r-mass)))
+ (home-page "http://www.stats.ox.ac.uk/pub/MASS4/")
+ (synopsis "R functions for classification")
+ (description
+ "This package provides various functions for classification, including
+k-nearest neighbour, Learning Vector Quantization and Self-Organizing Maps.")
+ ;; Either of the two versions can be picked.
+ (license (list license:gpl2 license:gpl3))))
+
(define-public r-bit
(package
(name "r-bit")
--
2.12.0
Information forwarded
to guix-patches@gnu.org:
bug#26095; Package guix-patches.
guix-patches@gnu.org
X-Loop: help-debbugs@gnu.org
Subject: bug#26095: [PATCH 04/17] gnu: Add r-cluster.
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* gnu/packages/statistics.scm (r-cluster): New variable.
---
gnu/packages/statistics.scm | 20 ++++++++++++++++++++
1 file changed, 20 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 9199c0b9e..1492dccfb 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -284,6 +284,26 @@ k-nearest neighbour, Learning Vector Quantization and Self-Organizing Maps.")
;; Either of the two versions can be picked.
(license (list license:gpl2 license:gpl3))))
+(define-public r-cluster
+ (package
+ (name "r-cluster")
+ (version "2.0.5")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "cluster" version))
+ (sha256
+ (base32
+ "1bkvqmv8h2c423q9ag2afb6s9j2vcdlxsf559zzbimraphrr2c2b"))))
+ (build-system r-build-system)
+ (home-page "http://cran.r-project.org/web/packages/cluster")
+ (synopsis "Methods for cluster analysis")
+ (description
+ "This package provides methods for cluster analysis. It is a much
+extended version of the original from Peter Rousseeuw, Anja Struyf and Mia
+Hubert, based on Kaufman and Rousseeuw (1990) \"Finding Groups in Data\".")
+ (license license:gpl2+)))
+
(define-public r-bit
(package
(name "r-bit")
--
2.12.0
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From: Ricardo Wurmus
To: 26095@debbugs.gnu.org
Subject: [PATCH 04/17] gnu: Add r-cluster.
Date: Tue, 14 Mar 2017 10:02:43 +0100
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* gnu/packages/statistics.scm (r-cluster): New variable.
---
gnu/packages/statistics.scm | 20 ++++++++++++++++++++
1 file changed, 20 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 9199c0b9e..1492dccfb 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -284,6 +284,26 @@ k-nearest neighbour, Learning Vector Quantization and Self-Organizing Maps.")
;; Either of the two versions can be picked.
(license (list license:gpl2 license:gpl3))))
+(define-public r-cluster
+ (package
+ (name "r-cluster")
+ (version "2.0.5")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "cluster" version))
+ (sha256
+ (base32
+ "1bkvqmv8h2c423q9ag2afb6s9j2vcdlxsf559zzbimraphrr2c2b"))))
+ (build-system r-build-system)
+ (home-page "http://cran.r-project.org/web/packages/cluster")
+ (synopsis "Methods for cluster analysis")
+ (description
+ "This package provides methods for cluster analysis. It is a much
+extended version of the original from Peter Rousseeuw, Anja Struyf and Mia
+Hubert, based on Kaufman and Rousseeuw (1990) \"Finding Groups in Data\".")
+ (license license:gpl2+)))
+
(define-public r-bit
(package
(name "r-bit")
--
2.12.0
Information forwarded
to guix-patches@gnu.org:
bug#26095; Package guix-patches.
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Subject: bug#26095: [PATCH 05/17] gnu: Add r-codetools.
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* gnu/packages/statistics.scm (r-codetools): New variable.
---
gnu/packages/statistics.scm | 18 ++++++++++++++++++
1 file changed, 18 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 1492dccfb..cbf5c14b1 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -304,6 +304,24 @@ extended version of the original from Peter Rousseeuw, Anja Struyf and Mia
Hubert, based on Kaufman and Rousseeuw (1990) \"Finding Groups in Data\".")
(license license:gpl2+)))
+(define-public r-codetools
+ (package
+ (name "r-codetools")
+ (version "0.2-15")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "codetools" version))
+ (sha256
+ (base32
+ "0h7sjmvvsi35041jp47cxhsqzgf1y8jrw6fxii7n26i8g7nrh1sf"))))
+ (build-system r-build-system)
+ (home-page "http://cran.r-project.org/web/packages/codetools")
+ (synopsis "Code analysis tools for R")
+ (description "This package provides code analysis tools for R.")
+ ;; Any version of the GPL.
+ (license (list license:gpl2+ license:gpl3+))))
+
(define-public r-bit
(package
(name "r-bit")
--
2.12.0
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From: Ricardo Wurmus
To: 26095@debbugs.gnu.org
Subject: [PATCH 05/17] gnu: Add r-codetools.
Date: Tue, 14 Mar 2017 10:02:44 +0100
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* gnu/packages/statistics.scm (r-codetools): New variable.
---
gnu/packages/statistics.scm | 18 ++++++++++++++++++
1 file changed, 18 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 1492dccfb..cbf5c14b1 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -304,6 +304,24 @@ extended version of the original from Peter Rousseeuw, Anja Struyf and Mia
Hubert, based on Kaufman and Rousseeuw (1990) \"Finding Groups in Data\".")
(license license:gpl2+)))
+(define-public r-codetools
+ (package
+ (name "r-codetools")
+ (version "0.2-15")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "codetools" version))
+ (sha256
+ (base32
+ "0h7sjmvvsi35041jp47cxhsqzgf1y8jrw6fxii7n26i8g7nrh1sf"))))
+ (build-system r-build-system)
+ (home-page "http://cran.r-project.org/web/packages/codetools")
+ (synopsis "Code analysis tools for R")
+ (description "This package provides code analysis tools for R.")
+ ;; Any version of the GPL.
+ (license (list license:gpl2+ license:gpl3+))))
+
(define-public r-bit
(package
(name "r-bit")
--
2.12.0
Information forwarded
to guix-patches@gnu.org:
bug#26095; Package guix-patches.
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Date: Tue, 14 Mar 2017 10:02:45 +0100
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* gnu/packages/statistics.scm (r-foreign): New variable.
---
gnu/packages/statistics.scm | 20 ++++++++++++++++++++
1 file changed, 20 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index cbf5c14b1..2317b37c3 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -322,6 +322,26 @@ Hubert, based on Kaufman and Rousseeuw (1990) \"Finding Groups in Data\".")
;; Any version of the GPL.
(license (list license:gpl2+ license:gpl3+))))
+(define-public r-foreign
+ (package
+ (name "r-foreign")
+ (version "0.8-67")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "foreign" version))
+ (sha256
+ (base32
+ "1mcrm2pydimbyjhkrw5h380bifj1jhwzifph1xgh90asf3lvd1xd"))))
+ (build-system r-build-system)
+ (home-page "http://cran.r-project.org/web/packages/foreign")
+ (synopsis "Read data stored by other statistics software")
+ (description
+ "This package provides functions for reading and writing data stored by
+some versions of Epi Info, Minitab, S, SAS, SPSS, Stata, Systat and Weka and
+for reading and writing some dBase files.")
+ (license license:gpl2+)))
+
(define-public r-bit
(package
(name "r-bit")
--
2.12.0
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From: Ricardo Wurmus
To: 26095@debbugs.gnu.org
Subject: [PATCH 06/17] gnu: Add r-foreign.
Date: Tue, 14 Mar 2017 10:02:45 +0100
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* gnu/packages/statistics.scm (r-foreign): New variable.
---
gnu/packages/statistics.scm | 20 ++++++++++++++++++++
1 file changed, 20 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index cbf5c14b1..2317b37c3 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -322,6 +322,26 @@ Hubert, based on Kaufman and Rousseeuw (1990) \"Finding Groups in Data\".")
;; Any version of the GPL.
(license (list license:gpl2+ license:gpl3+))))
+(define-public r-foreign
+ (package
+ (name "r-foreign")
+ (version "0.8-67")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "foreign" version))
+ (sha256
+ (base32
+ "1mcrm2pydimbyjhkrw5h380bifj1jhwzifph1xgh90asf3lvd1xd"))))
+ (build-system r-build-system)
+ (home-page "http://cran.r-project.org/web/packages/foreign")
+ (synopsis "Read data stored by other statistics software")
+ (description
+ "This package provides functions for reading and writing data stored by
+some versions of Epi Info, Minitab, S, SAS, SPSS, Stata, Systat and Weka and
+for reading and writing some dBase files.")
+ (license license:gpl2+)))
+
(define-public r-bit
(package
(name "r-bit")
--
2.12.0
Information forwarded
to guix-patches@gnu.org:
bug#26095; Package guix-patches.
guix-patches@gnu.org
X-Loop: help-debbugs@gnu.org
Subject: bug#26095: [PATCH 07/17] gnu: Add r-kernsmooth.
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Date: Tue, 14 Mar 2017 10:02:46 +0100
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* gnu/packages/statistics.scm (r-kernsmooth): New variable.
---
gnu/packages/statistics.scm | 22 ++++++++++++++++++++++
1 file changed, 22 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 2317b37c3..0b092ed15 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -342,6 +342,28 @@ some versions of Epi Info, Minitab, S, SAS, SPSS, Stata, Systat and Weka and
for reading and writing some dBase files.")
(license license:gpl2+)))
+(define-public r-kernsmooth
+ (package
+ (name "r-kernsmooth")
+ (version "2.23-15")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "KernSmooth" version))
+ (sha256
+ (base32
+ "1xhha8kw10jv8pv8b61hb5in9qiw3r2a9kdji3qlm991s4zd4wlb"))))
+ (properties `((upstream-name . "KernSmooth")))
+ (build-system r-build-system)
+ (home-page "http://cran.r-project.org/web/packages/KernSmooth")
+ (synopsis "Functions for kernel smoothing")
+ (description
+ "This package provides functions for kernel smoothing (and density
+estimation) corresponding to the book: Wand, M.P. and Jones, M.C. (1995)
+\"Kernel Smoothing\".")
+ ;; Unlimited distribution
+ (license (license:non-copyleft "file://LICENCE.note"))))
+
(define-public r-bit
(package
(name "r-bit")
--
2.12.0
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From: Ricardo Wurmus
To: 26095@debbugs.gnu.org
Subject: [PATCH 07/17] gnu: Add r-kernsmooth.
Date: Tue, 14 Mar 2017 10:02:46 +0100
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* gnu/packages/statistics.scm (r-kernsmooth): New variable.
---
gnu/packages/statistics.scm | 22 ++++++++++++++++++++++
1 file changed, 22 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 2317b37c3..0b092ed15 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -342,6 +342,28 @@ some versions of Epi Info, Minitab, S, SAS, SPSS, Stata, Systat and Weka and
for reading and writing some dBase files.")
(license license:gpl2+)))
+(define-public r-kernsmooth
+ (package
+ (name "r-kernsmooth")
+ (version "2.23-15")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "KernSmooth" version))
+ (sha256
+ (base32
+ "1xhha8kw10jv8pv8b61hb5in9qiw3r2a9kdji3qlm991s4zd4wlb"))))
+ (properties `((upstream-name . "KernSmooth")))
+ (build-system r-build-system)
+ (home-page "http://cran.r-project.org/web/packages/KernSmooth")
+ (synopsis "Functions for kernel smoothing")
+ (description
+ "This package provides functions for kernel smoothing (and density
+estimation) corresponding to the book: Wand, M.P. and Jones, M.C. (1995)
+\"Kernel Smoothing\".")
+ ;; Unlimited distribution
+ (license (license:non-copyleft "file://LICENCE.note"))))
+
(define-public r-bit
(package
(name "r-bit")
--
2.12.0
Information forwarded
to guix-patches@gnu.org:
bug#26095; Package guix-patches.
guix-patches@gnu.org
X-Loop: help-debbugs@gnu.org
Subject: bug#26095: [PATCH 08/17] gnu: r-lattice: Move to other recommended R packages.
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* gnu/packages/statistics.scm (r-lattice): Move to the set of recommended R
packages.
---
gnu/packages/statistics.scm | 40 ++++++++++++++++++++--------------------
1 file changed, 20 insertions(+), 20 deletions(-)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 0b092ed15..0fa3be42c 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -364,6 +364,26 @@ estimation) corresponding to the book: Wand, M.P. and Jones, M.C. (1995)
;; Unlimited distribution
(license (license:non-copyleft "file://LICENCE.note"))))
+(define-public r-lattice
+ (package
+ (name "r-lattice")
+ (version "0.20-34")
+ (source (origin
+ (method url-fetch)
+ (uri (cran-uri "lattice" version))
+ (sha256
+ (base32
+ "0615h69czr73k47whhzimf1qxv5qk0cabcrkljwhyrn6m6piq6ja"))))
+ (build-system r-build-system)
+ (home-page "http://lattice.r-forge.r-project.org/")
+ (synopsis "High-level data visualization system")
+ (description
+ "The lattice package provides a powerful and elegant high-level data
+visualization system inspired by Trellis graphics, with an emphasis on
+multivariate data. Lattice is sufficient for typical graphics needs, and is
+also flexible enough to handle most nonstandard requirements.")
+ (license license:gpl2+)))
+
(define-public r-bit
(package
(name "r-bit")
@@ -2171,26 +2191,6 @@ scaling functions for R.")
"This package provides an integration of base and grid graphics for R.")
(license license:gpl2+)))
-(define-public r-lattice
- (package
- (name "r-lattice")
- (version "0.20-34")
- (source (origin
- (method url-fetch)
- (uri (cran-uri "lattice" version))
- (sha256
- (base32
- "0615h69czr73k47whhzimf1qxv5qk0cabcrkljwhyrn6m6piq6ja"))))
- (build-system r-build-system)
- (home-page "http://lattice.r-forge.r-project.org/")
- (synopsis "High-level data visualization system")
- (description
- "The lattice package provides a powerful and elegant high-level data
-visualization system inspired by Trellis graphics, with an emphasis on
-multivariate data. Lattice is sufficient for typical graphics needs, and is
-also flexible enough to handle most nonstandard requirements.")
- (license license:gpl2+)))
-
(define-public r-latticeextra
(package
(name "r-latticeextra")
--
2.12.0
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From: Ricardo Wurmus
To: 26095@debbugs.gnu.org
Subject: [PATCH 08/17] gnu: r-lattice: Move to other recommended R packages.
Date: Tue, 14 Mar 2017 10:02:47 +0100
Message-Id: <20170314090256.7695-8-rekado@example.com>
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* gnu/packages/statistics.scm (r-lattice): Move to the set of recommended R
packages.
---
gnu/packages/statistics.scm | 40 ++++++++++++++++++++--------------------
1 file changed, 20 insertions(+), 20 deletions(-)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 0b092ed15..0fa3be42c 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -364,6 +364,26 @@ estimation) corresponding to the book: Wand, M.P. and Jones, M.C. (1995)
;; Unlimited distribution
(license (license:non-copyleft "file://LICENCE.note"))))
+(define-public r-lattice
+ (package
+ (name "r-lattice")
+ (version "0.20-34")
+ (source (origin
+ (method url-fetch)
+ (uri (cran-uri "lattice" version))
+ (sha256
+ (base32
+ "0615h69czr73k47whhzimf1qxv5qk0cabcrkljwhyrn6m6piq6ja"))))
+ (build-system r-build-system)
+ (home-page "http://lattice.r-forge.r-project.org/")
+ (synopsis "High-level data visualization system")
+ (description
+ "The lattice package provides a powerful and elegant high-level data
+visualization system inspired by Trellis graphics, with an emphasis on
+multivariate data. Lattice is sufficient for typical graphics needs, and is
+also flexible enough to handle most nonstandard requirements.")
+ (license license:gpl2+)))
+
(define-public r-bit
(package
(name "r-bit")
@@ -2171,26 +2191,6 @@ scaling functions for R.")
"This package provides an integration of base and grid graphics for R.")
(license license:gpl2+)))
-(define-public r-lattice
- (package
- (name "r-lattice")
- (version "0.20-34")
- (source (origin
- (method url-fetch)
- (uri (cran-uri "lattice" version))
- (sha256
- (base32
- "0615h69czr73k47whhzimf1qxv5qk0cabcrkljwhyrn6m6piq6ja"))))
- (build-system r-build-system)
- (home-page "http://lattice.r-forge.r-project.org/")
- (synopsis "High-level data visualization system")
- (description
- "The lattice package provides a powerful and elegant high-level data
-visualization system inspired by Trellis graphics, with an emphasis on
-multivariate data. Lattice is sufficient for typical graphics needs, and is
-also flexible enough to handle most nonstandard requirements.")
- (license license:gpl2+)))
-
(define-public r-latticeextra
(package
(name "r-latticeextra")
--
2.12.0