\version "2.12.0"
\header {
  texidoc = "Bar lines are positioned correctly when using custom
staves which are not centered around position@tie{}0.
"
}
\new Staff {
  \override Staff.StaffSymbol #'line-positions = #'(1 3 5 7 9)
  c''1 \bar "||"
  c''1 \bar ":"
  c''1 \bar "|."
}