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* gnu: python-aiorpcx: capitalize descriptionArne Babenhauserheide2019-07-151-2/+2
| | | | | | * gnu/packages/python-web.scm (python-aiorpcx): capitalize description Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: python-aiohttp: Update to 3.5.4Arne Babenhauserheide2019-07-151-2/+2
| | | | | | * gnu/packages/python-web.scm (python-aiohttp): Update to 3.5.4. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: python-aiorpcx: Update to 0.18.3Arne Babenhauserheide2019-07-151-2/+2
| | | | | | * gnu/packages/python-web.scm (python-aiorpcx): Update to 0.18.3 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* doc: Build a top-level index of the manuals.Ludovic Courtès2019-07-151-156/+204
| | | | | | | | | | | Suggested by Julien Lepiller. * doc/build.scm (html-manual-indexes)[build]: Add 'with-extensions'. (translate): Actually honor DOMAIN. Add call to 'bindtextdomain' for ISO-CODES. (%iso639-languages): New variable. (language-code->name, top-level-index): New procedures. Add call to 'write-html' for OUTPUT/index.html.
* doc: Generalize build procedures of HTML indexes.Ludovic Courtès2019-07-151-41/+45
| | | | | | | | | * doc/build.scm (html-manual-indexes)[build](sxml-index): Generalize; add a 'title' and a 'body' parameter and honor them. (language-index): New procedure. (write-index): Remove. (write-html): New procedure. Use 'write-html' and 'language-index'.
* gnu: monero: Make tests more verbose.Guillaume Le Vaillant2019-07-151-1/+1
| | | | | | | | | | Increase the verbosity of the 'check' phase to prevent 'core_tests' from hitting 'max-silent-timeout'. * gnu/packages/finance.scm (monero)[arguments]: Add '--verbose' option to 'check' phase. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add python-ont-fast5-api.Ricardo Wurmus2019-07-151-0/+29
| | | | * gnu/packages/bioinformatics.scm (python-ont-fast5-api): New variable.
* gnu: Add python-progressbar33.Ricardo Wurmus2019-07-151-0/+22
| | | | * gnu/packages/python-xyz.scm (python-progressbar33): New variable.
* gnu: rkflashtool: Update to 5.2-1.8966c4e.Efraim Flashner2019-07-151-5/+5
| | | | | | * gnu/packages/flashing-tools.scm (rkflashtool): Update to 5.2-1.8966c4e. [version]: Use 'git-version'. [source]: Use 'git-file-name'.
* channels: Avoid use of 'derivation-input-path'.Ludovic Courtès2019-07-151-2/+3
| | | | | * guix/channels.scm (old-style-guix?): Use 'derivation-name' rather than 'derivation-input-path'.
* gexp: 'lowered-gexp-guile' now returns a <derivation-input>.Ludovic Courtès2019-07-154-7/+16
| | | | | | | | | * guix/derivations.scm (derivation-input-output-path): New procedure. * guix/gexp.scm (lower-gexp): Wrap GUILE in a <derivation-input>. (gexp->derivation): Adjust accordingly. * guix/remote.scm (remote-pipe-for-gexp, remote-eval): Adjust accordingly. * tests/gexp.scm ("lower-gexp"): Adjust accordingly.
* derivations: Deprecate the previous calling convention.Ludovic Courtès2019-07-152-2/+26
| | | | | | | | | | | | We will eventually require #:inputs to be a list of <derivation-input>; store items will have to be passed as #:sources, already interned. * guix/derivations.scm (warn-about-derivation-deprecation): New procedure. (derivation): Add #:%deprecation-warning? parameter. [warn-deprecation]: New macro. [input->derivation-input, input->source]: Use it. (build-expression->derivation): Pass #:%deprecation-warning?. * po/guix/POTFILES.in: Add guix/derivations.scm.
* derivations: Update tests to use new calling convention.Ludovic Courtès2019-07-151-54/+35
| | | | | | | | | | | | | | | | | | | | | | | | | * tests/derivations.scm ("build derivation with 1 source"): Adjust to new 'derivation' calling convention. ("identical files are deduplicated"): Likewise. ("fixed-output-derivation?"): Likewise. ("fixed-output derivation"): Likewise. ("fixed-output derivation, recursive"): Likewise. ("derivation with a fixed-output input"): Likewise. ("multiple-output derivation"): Likewise. ("multiple-output derivation, non-alphabetic order"): Likewise. ("read-derivation vs. derivation"): Likewise. ("user of multiple-output derivation"): Likewise. ("derivation with #:references-graphs"): Likewise. ("derivation #:allowed-references, ok"): Likewise. ("derivation #:allowed-references, not allowed"): Likewise. ("derivation #:allowed-references, self allowed"): Likewise. ("derivation #:allowed-references, self not allowed"): Likewise. ("derivation #:disallowed-references, ok"): Likewise. ("derivation #:disallowed-references, not ok"): Likewise. ("derivation #:leaked-env-vars"): Likewise. ("build derivation with coreutils"): Likewise. ("map-derivation, sources"): Likewise. ("derivation with local file as input"): Remove.
* derivations: 'map-derivation' uses the new 'derivation' calling convention.Ludovic Courtès2019-07-151-12/+10
| | | | | | | * guix/derivations.scm (map-derivation)[input->output-paths]: Adjust to deal with an argument that's either 'derivation-input?' or a string. [rewritten-input]: Return a <derivation-input> or a string. Pass #:inputs and #:sources to 'derivation'.
* download: Use the new 'derivation' calling convention.Ludovic Courtès2019-07-151-2/+1
| | | | | * guix/download.scm (built-in-download): Pass MIRRORS and CONTENT-ADDRESSED-MIRRORS as #:sources, not #:inputs.
* gnu: guile-bootstrap: Use the new 'derivation' calling convention.Ludovic Courtès2019-07-151-3/+4
| | | | | | * gnu/packages/bootstrap.scm (raw-build): In 'derivation' call, distinguish #:inputs from #:sources, passing a list of <derivation-input> as #:inputs.
* gexp: <lowered-gexp> separates sources from derivation inputs.Ludovic Courtès2019-07-153-67/+60
| | | | | | | | | | | | | | | | | * guix/gexp.scm (lower-inputs): Return either <derivation-input> records or store items. (lower-reference-graphs): Return file/input pairs. (<lowered-gexp>)[sources]: New field. (lower-gexp): Adjust accordingly. (gexp->input-tuple): Remove. (gexp->derivation)[graphs-file-names]: Handle only the 'derivation-input?' and 'string?' cases. Pass #:sources to 'raw-derivation'; ensure #:inputs contains only <derivation-input> records. * guix/remote.scm (remote-eval): Adjust to the new <lowered-gexp> interface. * tests/gexp.scm ("lower-gexp"): Adjust to expect <derivation-input> records instead of <gexp-input>
* derivations: 'derivation' primitive accepts <derivation> and #:sources.Ludovic Courtès2019-07-151-2/+6
| | | | | | | | This brings us closer to the <derivation> data type. * guix/derivations.scm (derivation): Add #:sources parameter. [input->derivation-input]: Add clause for 'derivation-input?'. Honor SOURCES.
* syscalls: Use 'define-as-needed' for 'AT_' constants introduced in Guile 2.2.5.Ludovic Courtès2019-07-151-13/+6
| | | | | | * guix/build/syscalls.scm (AT_FDCWD, AT_SYMLINK_NOFOLLOW, AT_REMOVEDIR) (AT_SYMLINK_FOLLOW, AT_NO_AUTOMOUNT, AT_EMPTY_PATH): Define using 'define-as-needed'.
* compile: Report the name of the file that cannot be compiled.Ludovic Courtès2019-07-151-5/+10
| | | | | | | | | | Fixes <https://bugs.gnu.org/36640>. Reported by Robert Vollmert <rob@vllmrt.net>. * guix/build/compile.scm (call/exit-on-exception): Add 'file' parameter and honor it. (exit-on-exception): Likewise. (compile-files): Pass FILE to 'exit-on-exception'.
* gnu: linux-libre: Fix build on aarch64.Pierre Langlois2019-07-141-5/+1
| | | | | * gnu/packages/linux.scm (make-linux-libre)[arguments]: Remove 'work-around-gcc-7-include-path-issue phase.
* gnu: linux-libre: Update to 5.2.Mark H Weaver2019-07-147-429/+2284
| | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/linux.scm (%linux-libre-version): Update to 5.2. (%linux-libre-hash): Update hash. * linux-libre-5.1: Rename to ... * linux-libre-5.2: ... this. Use %linux-libre-5.2-patches. * linux-libre: Switch to linux-libre-5.2. * linux-libre-arm-veyron, linux-libre-arm-generic, linux-libre-arm-omap2plus: Use %linux-libre-5.2-patches. * linux-libre-headers-5.1: Rename to ... * linux-libre-headers-5.2: ... this. * %linux-libre-5.1-patches: Rename to ... * %linux-libre-5.2-patches: ... this. * gnu/packages/aux-files/linux-libre/5.1-arm-veyron.conf, gnu/packages/aux-files/linux-libre/5.1-arm.conf, gnu/packages/aux-files/linux-libre/5.1-arm64.conf, gnu/packages/aux-files/linux-libre/5.1-i686.conf, gnu/packages/aux-files/linux-libre/5.1-x86_64.conf: Delete files. * gnu/packages/aux-files/linux-libre/5.2-arm-veyron.conf, gnu/packages/aux-files/linux-libre/5.2-arm.conf, gnu/packages/aux-files/linux-libre/5.2-arm64.conf, gnu/packages/aux-files/linux-libre/5.2-i686.conf, gnu/packages/aux-files/linux-libre/5.2-x86_64.conf: New files. * Makefile.am (AUX_FILES): Update accordingly.
* Revert "guix: node-build-system: Use guile-json instead of a custom parser."Julien Lepiller2019-07-144-20/+406
| | | | | | | | | The effect of this change was to import the (json parser) from the host side into the build side. The solution here would be to do the equivalent of ‘with-extensions’ for gexps. Since we don't use gexps for build systems just yet, revert this for now. This reverts commit 8eb0ba532ebbebef23180e666e0607ea735f9c1a.
* gnu: Add emacs-elpher.Arun Isaac2019-07-141-0/+34
| | | | * gnu/packages/emacs-xyz.scm (emacs-elpher): New variable.
* gnu: nzbget: Update to 21.0.Rutger Helling2019-07-141-2/+2
| | | | * gnu/packages/networking.scm (nzbget): Update to 21.0.
* guix: node-build-system: Use guile-json instead of a custom parser.Julien Lepiller2019-07-144-406/+20
| | | | | | | * guix/build/json.scm: Remove file. * Makefile.am: Remove it. * guix/build/node-build-system.scm: Use (json parser) instead of (guix build json). * guix/build-system/node.scm: Idem.
* build: Add node-build-system.Jelle Licht2019-07-145-0/+702
| | | | | | | | | | * guix/build/node-build-system.scm: New file. * guix/build-system/node.scm: New file. * guix/build/json.scm: New file. * doc/guix.texi: Document it. * Makefile.am: Added new files. Co-Authored-By: Julien Lepiller <julien@lepiller.eu>
* gnu: Add evisum.Efraim Flashner2019-07-141-0/+34
| | | | * gnu/packages/enlightenment.scm (evisum): New variable.
* channels: Add optional directory to channel metadata.Jan Nieuwenhuizen2019-07-142-41/+65
| | | | | | | * guix/channels.scm (<channel-metadata>): Add directory slot. Update users. (read-channel-metadata-from-source): New function. (standard-module-derivation): Use it. * doc/guix.texi (Package Modules in a Subdirectory): New subsection.
* gnu: Add s-tui.Christopher Baines2019-07-131-0/+22
| | | | * gnu/packages/admin.scm (s-tui): New variable.
* gnu: python-rpy2: Update to 3.0.4-1.19868a8.Ricardo Wurmus2019-07-131-53/+68
| | | | | | | | | * gnu/packages/statistics.scm (python-rpy2): Update to 3.0.4-1.19868a8. [source]: Fetch from repository. [propagated-inputs]: Add python-cffi, python-numpy, python-pandas, python-ipython, and python-tzlocal. [native-inputs]: Add python-pytest. [arguments]: Set TZ variable and use pytest to run the tests.
* doc: Update keyserver URL.Leo Famulari2019-07-131-1/+1
| | | | * HACKING (Commit Access): Change keyserver URL to 'keys.openpgp.org'.
* gnu: Add pngquant.Hartmut Goebel2019-07-131-0/+44
| | | | * gnu/packages/image.scm (pngquant): New variable.
* gnu: Add libimagequant.Hartmut Goebel2019-07-131-1/+25
| | | | * gnu/packages/image.scm (libimagequant): New variable.
* gnu: docker-compose: Update to 1.24.1.Jacob MacDonald2019-07-131-4/+11
| | | | | | * gnu/packages/docker.scm (docker-compose): Update to 1.24.1. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: python-docker-py: Update to 3.7.3.Jacob MacDonald2019-07-131-4/+9
| | | | | | | | | * gnu/packages/docker.scm (python-docker-py): Update to 3.7.3. [inputs]: Use PYTHON-REQUESTS-2.20 instead of PYTHON-REQUESTS. Add PYTHON-DOCKER-PYCREDS, PYTHON-IPADDRESS, PYTHON-PARAMIKO, and PYTHON-URLLIB3-1.24. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* gnu: python-dockerpty: Update to 0.4.1.Jacob MacDonald2019-07-131-2/+2
| | | | | | * gnu/packages/docker.scm (python-dockerpty): Update to 0.4.1. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: python-docker-pycreds: Update to 0.4.0.Jacob MacDonald2019-07-131-2/+2
| | | | | | * gnu/packages/docker.scm (python-docker-pycreds): Update to 0.4.0. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: python-texttable: Update to 0.9.1.Jacob MacDonald2019-07-131-2/+2
| | | | | | * gnu/packages/python-xyz.scm (python-texttable): Update to 0.9.1. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add python-requests-2.20.Jacob MacDonald2019-07-131-0/+16
| | | | | | * gnu/packages/python-web.scm (python-requests-2.20): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add python-idna-2.7.Jacob MacDonald2019-07-131-0/+11
| | | | | | * gnu/packages/python-xyz.scm (python-idna-2.7): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add python-urllib3-1.24.Jacob MacDonald2019-07-131-0/+12
| | | | | | * gnu/packages/python-web.scm (python-urllib3-1.24): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add python-cached-property.Jacob MacDonald2019-07-131-0/+37
| | | | | | * gnu/packages/python-xyz.scm (python-cached-property): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: rush: Update to 2.1.Ludovic Courtès2019-07-131-2/+2
| | | | * gnu/packages/rush.scm (rush): Update to 2.1.
* gnu: pigx-rnaseq: Update to 0.0.10.Ricardo Wurmus2019-07-131-2/+2
| | | | * gnu/packages/bioinformatics.scm (pigx-rnaseq): Update to 0.0.10.
* doc: Increase VM memory size.Tobias Geerinckx-Rice2019-07-131-1/+1
| | | | | * doc/guix.texi (Running Guix in a VM): Bump ‘-m‘ to 1 GiB to match its @item below, and have a chance of being usable, too.
* doc: Update gpg key fetching instructions.Tobias Geerinckx-Rice2019-07-131-5/+5
| | | | | | | | | This mirrors the steps performed by etc/guix-install.sh. * doc/guix.texi (KEY-SERVER): Replace moribund SKS key servers with... (OPENPGP-SIGNING-KEY-URL): ...the TLS PKI of the future. (Binary Installation, USB Stick and DVD Installation): Update the @example gpg command to download the key directly from Savannah.
* gnu: wcslib: Update to 6.2.Tobias Geerinckx-Rice2019-07-131-3/+8
| | | | | * gnu/packages/astronomy.scm (wcslib): Update to 6.2. [arguments]: Add #:configure-flags to find CFITSIO.
* gnu: wcslib: Don't use NAME in source URI.Tobias Geerinckx-Rice2019-07-131-1/+1
| | | | * gnu/packages/astronomy.scm (wcslib)[source]: Hard-code NAME.
* gnu: guile-wisp: fix urlArne Babenhauserheide2019-07-121-1/+1
| | | | | | * gnu/packages/guile-xyz.scm (guile-wisp): add www to url (required due to hoster-changes) Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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