| Commit message (Collapse) | Author | Age | Files | Lines |
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* gnu/packages/statistics.scm (r-withr): New variable.
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* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.2.2.
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* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to
1.22.13.
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* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.30.4.
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* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to
1.6.3.
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* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to
1.0.2.
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* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.38.4.
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* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.22.4.
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* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.6.3.
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Reported by shanemikel_ on irc.
* gnu/packages/ghostscript.scm (libpaper)[source]: Update source url to
download from Fedora.
[home-page]: Use https.
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Reported by <rain1@openmailbox.org>.
* gnu/packages/package-management.scm (guix-0.10.0)[arguments]: Use '=
instead of 'prefix in call to 'wrap-program'.
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* gnu/packages/gnome.scm (libzapojit): New variable.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/calendar.scm (khal)[arguments]: Disable failing tests in
'disable-tests' phase.
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* gnu/packages/gstreamer.scm (gst-plugins-good): Update to 1.8.0.
[home-page]: Use https.
[arguments]: Disable tests that fail non-deterministically.
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* gnu/packages/gstreamer.scm (gst-plugins-ugly): Update to 1.8.0.
[home-page]: Use https.
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* gnu/packages/gstreamer.scm (python-gst, python2-gst): Update to 1.8.0.
[home-page]: Use https.
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* gnu/packages/gstreamer.scm (gst-plugins-base): Update to 1.8.0.
[home-page]: Use https.
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* gnu/packages/gstreamer.scm (gstreamer): Update to 1.8.0.
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* gnu/packages/package-management.scm (guix-devel): Update to 7611393.
(guix): Set to GUIX-DEVEL.
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* gnu/packages/web.scm (uwsgi): New variable.
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* gnu/packages/version-control.scm (cgit): New variable.
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This updates 58f0aae.
* gnu/packages/package-management.scm (guix): Set to GUIX-0.10.0.
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* gnu/packages/package-management.scm (guix-0.8.3): Rename to...
(guix-0.10.0): ... this. Adjust users.
(guix): Set to GUIX-0.10.0.
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Suggested by Leo Famulari and others.
* guix/scripts/system.scm (maybe-suggest-running-guix-pull): New
procedure.
(perform-action): Call it when ACTION is 'reconfigure.
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Suggested by Chris Marusich <cmmarusich@gmail.com>.
* doc/guix.texi (Limitations): Increase package count.
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This allows GuixSD to default to the right list of URLs, with
mirror.hydra.gnu.org coming first.
Reported by Chris Marusich <cmmarusich@gmail.com>.
* guix/store.scm (%default-substitute-urls): Prepend
"mirror.hydra.gnu.org."
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Suggested by Chris Marusich <cmmarusich@gmail.com>.
* doc/guix.texi (Proceeding with the Installation): Explain why the
config file should be on the target file system.
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Suggested by Chris Marusich <cmmarusich@gmail.com>.
* doc/guix.texi (Preparing for Installation): Add "-v" for dhclient.
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Based on a suggestion by Chris Marusich <cmmarusich@gmail.com>.
* doc/guix.texi (System Installation): Suggest running "info info".
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Suggested by Chris Marusich <cmmarusich@gmail.com>.
* doc/guix.texi (Proceeding with the Installation): Clarify what
'cow-store' is about.
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Suggested by Jan Nieuwenhuizen <janneke@gnu.org>.
* doc/guix.texi (Preparing for Installation): Make it clear that
networking is required.
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* doc/guix.texi (Security Updates): Add paragraph on the big picture of
security updates. Cross-reference 'guix lint'.
(Invoking guix lint): Add CVE URLs.
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* gnu/packages/music.scm (qtractor): Update to 0.7.5.
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* gnu/packages/music.scm (nose)[native-inputs]: Add python-nose.
[arguments]: Replace 'check' and use python-nose.
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Switching to execlp means that the process spawned in a container is PID
1, which obsoleted one of the 'guix environment --container' tests
because the init process can't be killed in the usual manner.
* guix/scripts/environment.scm (launch-environment/fork): New procedure.
(launch-environment): Switch from system* to execlp. Add handler for
SIGINT.
(guix-environment): Use launch-environment/fork.
* tests/guix-environment-container.sh: Replace abnormal exit test with
one that works now that the spawned process is PID 1.
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* gnu/packages/music.scm (pyechonest)[description]: Remove "open source" from
the description.
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* gnu/packages/maths.scm (pspp): Update to 0.10.0.
[inputs]: Switch gtk+-2 to gtk+, gtksourceview-2 to gtksourceview.
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* gnu/packages/sdl.scm (sdl2-ttf): Update to 2.0.14 and remove bundled
libraries from source tarball.
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* gnu/packages/sdl.scm (sdl2-image): Update to 2.0.1.
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* gnu/packages/sdl.scm (sdl2-mixer): Update to 2.0.1 and remove bundled
libraries in source tarball.
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* gnu/packages/sdl.scm (sdl-mixer)[inputs]: Add libmodplug.
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* gnu/packages/sdl.scm (sdl2): Update to 2.0.4.
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* doc/guix.texi (Preparing for Installation): Fix typo.
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* gnu/packages/kodi.scm (crossguid)[source]: Set explicit file-name to
satisfy linter.
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* guix/scripts/environment.scm (launch-environment/container): Change
$HOME to the current user's home directory instead of
/homeless-shelter. Create a dummy /etc/passwd with a single entry for
the current user.
* doc/guix.texi ("invoking guix environment"): Add a note about the
dummy home directory and /etc/passwd.
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* doc/guix.texi (Features): Mention trust and 'guix challenge'.
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